STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51512.1Glycosyltransferase family 28. (382 aa)    
Predicted Functional Partners:
BAJ51511.1
Conserved hypothetical protein.
  
    0.850
BAJ51509.1
CBS-domain-containing protein.
 
     0.808
BAJ51510.1
Conserved hypothetical protein.
       0.802
BAJ51508.1
Conserved hypothetical protein; Fibronectin-binding protein A, N-terminal.
       0.783
BAJ51513.1
Conserved hypothetical protein.
       0.615
BAJ49966.1
Hypothetical protein.
  
     0.577
BAJ51507.1
Hypothetical protein.
       0.556
BAJ50443.1
Phytoene synthase.
     
 0.525
BAJ51088.1
LPPG:Fo 2-phospho-L-lactate transferase.
  
    0.485
BAJ50761.1
Conserved hypothetical protein; GHMP kinases N terminal domain.
  
    0.456
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.