Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAJ51512.1Glycosyltransferase family 28. (382 aa)    
Predicted Functional Partners:
BAJ51511.1
Conserved hypothetical protein.
  
    0.863
BAJ51510.1
Conserved hypothetical protein.
       0.810
BAJ51509.1
CBS-domain-containing protein.
 
     0.807
BAJ51508.1
Conserved hypothetical protein; Fibronectin-binding protein A, N-terminal.
       0.784
BAJ51088.1
LPPG:Fo 2-phospho-L-lactate transferase.
  
    0.762
BAJ51513.1
Conserved hypothetical protein.
       0.615
BAJ49966.1
Hypothetical protein.
  
     0.577
BAJ51507.1
Hypothetical protein.
       0.556
BAJ50443.1
Phytoene synthase.
     
 0.476
BAJ50208.1
tRNA-intron endonuclease.
  
     0.452
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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