STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51514.1Sulfonate/nitrate/taurine ABC transporter ATP binding protein. (253 aa)    
Predicted Functional Partners:
BAJ51217.1
Sulfonate/nitrate/taurine ABC transporter permease.
 
 0.985
BAJ51515.1
Sulfonate/nitrate/taurine ABC transporter permease.
 
   
 0.915
BAJ51215.1
Sulfonate/nitrate/taurine ABC transporter substrate-binding protein.
 
 
 0.858
BAJ50990.1
Conserved hypothetical protein.
      0.849
BAJ50065.1
Conserved hypothetical protein; Sulfonate/nitrate/taurine ABC transporter substrate-binding protein.
  
 
 0.839
BAJ51513.1
Conserved hypothetical protein.
 
     0.733
BAJ51516.1
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.583
BAJ51517.1
Thioredoxin 1.
 
     0.552
BAJ49982.1
ABC-2 type transport system ATP-binding protein.
    
0.497
BAJ51425.1
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A.
 
   
 0.458
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.