Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ51516.1Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. (312 aa)    
Predicted Functional Partners:
BAJ50443.1
Phytoene synthase.
  
 0.947
BAJ50447.1
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
0.921
menA
Conserved hypothetical protein; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.856
uppS
Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
 
  
 0.818
BAJ51144.1
Conserved hypothetical protein; Beta-lactamase domain-containing protein.
  
    0.767
BAJ51517.1
Thioredoxin 1.
 
   
 0.741
BAJ51515.1
Sulfonate/nitrate/taurine ABC transporter permease.
       0.689
BAJ51480.1
Diphosphomevalonate decarboxylase.
 
 
 0.646
BAJ50190.1
Conserved hypothetical protein.
 
  
 0.638
BAJ51320.1
Conserved hypothetical protein; 3-oxoacyl-[acyl-carrier-protein (ACP); Belongs to the thiolase-like superfamily. UPF0219 family.
 
 
 0.619
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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