Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51525.1NADH dehydrogenase I subunit K. (105 aa)    
Predicted Functional Partners:
BAJ51119.1
Multicomponent Na+:H+ antiporter subunit D.
 
 
 0.996
BAJ51137.1
Multicomponent Na+:H+ antiporter subunit D.
  
 0.990
BAJ51139.1
NADH dehydrogenase I subunit L.
  
 0.990
BAJ51360.1
NADH dehydrogenase I subunit B; Belongs to the complex I 20 kDa subunit family.
   
  0.959
BAJ51362.1
NADH dehydrogenase I subunit D; Belongs to the complex I 49 kDa subunit family.
   
  0.959
BAJ51334.1
NADH dehydrogenase I subunit H.
    
 0.952
BAJ51336.1
Hypothetical protein.
 
 
 0.911
BAJ51523.1
Hypothetical protein.
       0.773
BAJ51524.1
Hypothetical protein.
       0.773
BAJ51361.1
NADH dehydrogenase I subunit C.
 
 
   0.663
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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