STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51559.1Simple sugar transporter permease. (354 aa)    
Predicted Functional Partners:
BAJ51558.1
Simple sugar ABC transporter permease.
 
 0.996
BAJ51560.1
Simple sugar transporter ATP-binding protein.
 
 0.988
BAJ51561.1
Simple sugar ABC transporter substrate-binding protein.
 
 
 0.984
BAJ50390.1
Sugar ABC transporter permease.
 
 0.981
BAJ50391.1
Conserved hypothetical protein.
 
 
 0.960
BAJ50392.1
Basic membrane lipoprotein.
 
 
 0.959
BAJ50732.1
Simple sugar transporter permease.
 
0.952
BAJ50743.1
Simple sugar ABC transporter ATP-binding protein.
 
 0.949
BAJ50388.1
Sugar ABC transporter ATP-binding protein.
 
 0.948
BAJ50393.1
Sugar ABC transporter ATP-binding protein.
 
 
 0.929
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.