Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51573.1Cysteine synthase A. (342 aa)    
Predicted Functional Partners:
BAJ50254.1
Aspartate aminotransferase.
 
  
 0.930
BAJ50113.1
Conserved hypothetical protein.
    
 0.926
cysS
cysteinyl-tRNA synthetase.
  
 
 0.925
BAJ50636.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.916
BAJ50679.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.916
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
 0.880
BAJ51045.1
Thiosulfate sulfurtransferase; Rhodanese domain-containing protein.
  
 
 0.861
BAJ51285.1
Thiosulfate sulfurtransferase.
  
 
 0.861
BAJ51316.1
Aminopeptidase N.
    
 0.835
BAJ50320.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
 
 0.830
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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