STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4VDE6_TETTSDEAD protein. (945 aa)    
Predicted Functional Partners:
Q23JA1_TETTS
BRCA1 carboxy-terminus (BRCT) domain protein.
   
 0.826
I7M9F6_TETTS
General transcription factor IIH subunit.
    
 0.799
I7MGZ2_TETTS
Transcription factor tfb4.
    
 0.794
Q22KF2_TETTS
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.789
I7MLW8_TETTS
Type III restriction enzyme, res subunit.
   
 0.770
Q22V14_TETTS
BRCA1 carboxy-terminus (BRCT) domain protein.
   
 0.760
Q22G12_TETTS
Ser/thr phosphatase family protein.
  
 0.752
Q231M7_TETTS
General transcription factor IIB.
    
 0.746
Q24FV0_TETTS
RNA polymerase Rpb5, carboxy-terminal domain protein.
    
 0.723
I7M6R9_TETTS
DNA-directed RNA polymerase subunit K.
    
 0.719
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.