STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I7M3R1_TETTSRibosomal RNA large subunit methyltransferase. (557 aa)    
Predicted Functional Partners:
Q248A8_TETTS
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.936
Q23RV6_TETTS
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
   0.931
I7LXI9_TETTS
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.930
I7M3H3_TETTS
Ribosome biogenesis NSA2-like protein.
  
 
 0.912
I7M9M6_TETTS
60S ribosomal protein L24.
   
 
 0.908
Q24CL6_TETTS
Noc2p family protein.
   
 
 0.906
W7WZD1_TETTS
rRNA processing protein (EBP2), putative.
   
 
 0.902
Q23G42_TETTS
Ribosome biogenesis protein WDR12, putative.
   
 
 0.895
Q245K5_TETTS
RNA recognition motif protein.
   
 
 0.891
I7MEK3_TETTS
Nucleolar complex-associated protein.
   
 
 0.881
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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