STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I7M4I3_TETTSRNA-binding domain protein. (571 aa)    
Predicted Functional Partners:
I7LZW0_TETTS
Splicing factor 3B subunit 1.
    
 
 0.952
I7M078_TETTS
DEAD/DEAH-box helicase.
   
 0.935
Q22C43_TETTS
Crooked neck-like protein.
   
 
 0.927
I7M1Z3_TETTS
Splicing factor 3A subunit 2.
   
 
 0.896
I7LTE1_TETTS
Splicing factor 3B subunit 3.
    
 
 0.833
Q22RK9_TETTS
PSP family protein.
   
 
 0.806
W7XFS7_TETTS
Small nuclear ribonucleoprotein.
   
   0.799
I7M3F9_TETTS
Zinc knuckle protein.
     
 0.723
Q22RL3_TETTS
Surp module family protein.
    
 
 0.703
Q22M17_TETTS
Pre-mRNA-splicing factor ini1.
    
 
 0.686
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.