STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I7MD88_TETTSRNA modification enzyme, MiaB family protein. (594 aa)    
Predicted Functional Partners:
Q22XJ7_TETTS
Exosome complex exonuclease RRP40, putative.
    
 
 0.993
Q23DD3_TETTS
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.750
I7LUL2_TETTS
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
 
 0.721
Q23QL9_TETTS
tRNA delta(2)-isopentenylpyrophosphate transferase, putative.
  
  
 0.614
Q230V5_TETTS
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
  
 0.603
I7MKW7_TETTS
SMP-30/gluconolaconase/LRE-like region protein.
  
  
 0.602
Q22WU7_TETTS
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
  
 0.595
I7M4A2_TETTS
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
  
 0.590
I7LXQ4_TETTS
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.571
I7MJ71_TETTS
Ribosome-recycling factor.
  
  
 0.561
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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