I7MJ43_TETTS protein (Tetrahymena thermophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

I7MJ43_TETTS

CAS/CSE protein, carboxy-terminal protein. (983 aa)

Predicted Functional Partners:

Q22R83_TETTS

0.835

W7XEE6_TETTS

0.835

Q22RS7_TETTS

0.579

Q23R26_TETTS

0.527

Q22WY9_TETTS

0.514

I7LWV7_TETTS

0.489

I7LZK4_TETTS

0.489

I7M0Y4_TETTS

0.489

I7M0Y6_TETTS

0.489

I7M1Q3_TETTS

0.489

Your Current Organism:

Tetrahymena thermophila

NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I7LWV7_TETTS	I7MJ43_TETTS	I7LWV7	I7MJ43	Importin subunit alpha, putative.	CAS/CSE protein, carboxy-terminal protein.	0.489
I7LWV7_TETTS	Q22R83_TETTS	I7LWV7	Q22R83	Importin subunit alpha, putative.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.466
I7LWV7_TETTS	Q22RS7_TETTS	I7LWV7	Q22RS7	Importin subunit alpha, putative.	Importin-beta amine-terminal domain protein.	0.722
I7LWV7_TETTS	Q22WY9_TETTS	I7LWV7	Q22WY9	Importin subunit alpha, putative.	Uncharacterized protein.	0.597
I7LWV7_TETTS	W7XEE6_TETTS	I7LWV7	W7XEE6	Importin subunit alpha, putative.	ADP-ribosylation factor family protein.	0.466
I7LZK4_TETTS	I7MJ43_TETTS	I7LZK4	I7MJ43	Importin subunit alpha; Belongs to the importin alpha family.	CAS/CSE protein, carboxy-terminal protein.	0.489
I7LZK4_TETTS	Q22R83_TETTS	I7LZK4	Q22R83	Importin subunit alpha; Belongs to the importin alpha family.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.466
I7LZK4_TETTS	Q22RS7_TETTS	I7LZK4	Q22RS7	Importin subunit alpha; Belongs to the importin alpha family.	Importin-beta amine-terminal domain protein.	0.722
I7LZK4_TETTS	Q22WY9_TETTS	I7LZK4	Q22WY9	Importin subunit alpha; Belongs to the importin alpha family.	Uncharacterized protein.	0.597
I7LZK4_TETTS	W7XEE6_TETTS	I7LZK4	W7XEE6	Importin subunit alpha; Belongs to the importin alpha family.	ADP-ribosylation factor family protein.	0.466
I7M0Y4_TETTS	I7MJ43_TETTS	I7M0Y4	I7MJ43	Armadillo/beta-catenin repeat protein.	CAS/CSE protein, carboxy-terminal protein.	0.489
I7M0Y4_TETTS	Q22R83_TETTS	I7M0Y4	Q22R83	Armadillo/beta-catenin repeat protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.466
I7M0Y4_TETTS	Q22RS7_TETTS	I7M0Y4	Q22RS7	Armadillo/beta-catenin repeat protein.	Importin-beta amine-terminal domain protein.	0.722
I7M0Y4_TETTS	Q22WY9_TETTS	I7M0Y4	Q22WY9	Armadillo/beta-catenin repeat protein.	Uncharacterized protein.	0.597
I7M0Y4_TETTS	W7XEE6_TETTS	I7M0Y4	W7XEE6	Armadillo/beta-catenin repeat protein.	ADP-ribosylation factor family protein.	0.466
I7M0Y6_TETTS	I7MJ43_TETTS	I7M0Y6	I7MJ43	Armadillo/beta-catenin-like repeat protein.	CAS/CSE protein, carboxy-terminal protein.	0.489
I7M0Y6_TETTS	Q22R83_TETTS	I7M0Y6	Q22R83	Armadillo/beta-catenin-like repeat protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.466
I7M0Y6_TETTS	Q22RS7_TETTS	I7M0Y6	Q22RS7	Armadillo/beta-catenin-like repeat protein.	Importin-beta amine-terminal domain protein.	0.722
I7M0Y6_TETTS	Q22WY9_TETTS	I7M0Y6	Q22WY9	Armadillo/beta-catenin-like repeat protein.	Uncharacterized protein.	0.597
I7M0Y6_TETTS	W7XEE6_TETTS	I7M0Y6	W7XEE6	Armadillo/beta-catenin-like repeat protein.	ADP-ribosylation factor family protein.	0.466