STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q22AI3_TETTSZinc finger, C3HC4 type (RING finger) protein. (369 aa)    
Predicted Functional Partners:
I7M9J4_TETTS
Ubiquitin carboxyl-terminal hydrolase.
     
 0.615
I7LWJ9_TETTS
ADP-ribosylation factor family protein.
     
 0.460
I7MN06_TETTS
Tetratricopeptide repeat protein.
     
 0.460
I7M627_TETTS
Uncharacterized protein.
   
 
  0.436
I7MAZ2_TETTS
Ubiquitin family protein.
    
  0.432
I7MMJ4_TETTS
Ubiquitin-40S ribosomal protein S27a.
    
  0.432
Q22L31_TETTS
Uncharacterized protein.
    
  0.432
W7XC40_TETTS
Ubiquitin-like Rad60 SUMO-like protein.
    
  0.432
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.