STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q22AM0_TETTSTransmembrane protein, putative. (2029 aa)    
Predicted Functional Partners:
W7X269_TETTS
Sec23/Sec24 zinc finger protein.
   
 0.556
Q22NS2_TETTS
Kelch repeat protein.
    
 0.522
Q23RV6_TETTS
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.477
I7LXQ4_TETTS
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.476
I7LVU6_TETTS
Uncharacterized protein.
    
 0.469
Q248A8_TETTS
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
  0.427
Q23G42_TETTS
Ribosome biogenesis protein WDR12, putative.
   
 0.411
RPL30
60S ribosomal protein L30; Belongs to the eukaryotic ribosomal protein eL30 family.
    
 0.407
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.