Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4VDR4_TETTS | I7LWZ3_TETTS | A4VDR4 | I7LWZ3 | Conjugation stage-specific protein. | RNA polymerase Rpb7, amine-terminal domain protein. | 0.999 |
A4VDR4_TETTS | I7LXA1_TETTS | A4VDR4 | I7LXA1 | Conjugation stage-specific protein. | Helicase carboxy-terminal domain protein. | 0.963 |
A4VDR4_TETTS | I7M2Q2_TETTS | A4VDR4 | I7M2Q2 | Conjugation stage-specific protein. | DNA repair helicase. | 0.963 |
A4VDR4_TETTS | I7M6R9_TETTS | A4VDR4 | I7M6R9 | Conjugation stage-specific protein. | DNA-directed RNA polymerase subunit K. | 0.999 |
A4VDR4_TETTS | I7M9F6_TETTS | A4VDR4 | I7M9F6 | Conjugation stage-specific protein. | General transcription factor IIH subunit. | 0.995 |
A4VDR4_TETTS | I7MGZ2_TETTS | A4VDR4 | I7MGZ2 | Conjugation stage-specific protein. | Transcription factor tfb4. | 0.995 |
A4VDR4_TETTS | Q22C11_TETTS | A4VDR4 | Q22C11 | Conjugation stage-specific protein. | Cyclin-dependent kinase-like protein. | 0.850 |
A4VDR4_TETTS | Q22KF2_TETTS | A4VDR4 | Q22KF2 | Conjugation stage-specific protein. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.994 |
A4VDR4_TETTS | Q231M7_TETTS | A4VDR4 | Q231M7 | Conjugation stage-specific protein. | General transcription factor IIB. | 0.999 |
A4VDR4_TETTS | Q235X0_TETTS | A4VDR4 | Q235X0 | Conjugation stage-specific protein. | DNA-directed RNA polymerase I and III subunit RPAC1. | 0.773 |
I7LWZ3_TETTS | A4VDR4_TETTS | I7LWZ3 | A4VDR4 | RNA polymerase Rpb7, amine-terminal domain protein. | Conjugation stage-specific protein. | 0.999 |
I7LWZ3_TETTS | I7LXA1_TETTS | I7LWZ3 | I7LXA1 | RNA polymerase Rpb7, amine-terminal domain protein. | Helicase carboxy-terminal domain protein. | 0.957 |
I7LWZ3_TETTS | I7M2Q2_TETTS | I7LWZ3 | I7M2Q2 | RNA polymerase Rpb7, amine-terminal domain protein. | DNA repair helicase. | 0.957 |
I7LWZ3_TETTS | I7M6R9_TETTS | I7LWZ3 | I7M6R9 | RNA polymerase Rpb7, amine-terminal domain protein. | DNA-directed RNA polymerase subunit K. | 0.999 |
I7LWZ3_TETTS | I7M9F6_TETTS | I7LWZ3 | I7M9F6 | RNA polymerase Rpb7, amine-terminal domain protein. | General transcription factor IIH subunit. | 0.994 |
I7LWZ3_TETTS | I7MGZ2_TETTS | I7LWZ3 | I7MGZ2 | RNA polymerase Rpb7, amine-terminal domain protein. | Transcription factor tfb4. | 0.995 |
I7LWZ3_TETTS | Q22C11_TETTS | I7LWZ3 | Q22C11 | RNA polymerase Rpb7, amine-terminal domain protein. | Cyclin-dependent kinase-like protein. | 0.828 |
I7LWZ3_TETTS | Q22KF2_TETTS | I7LWZ3 | Q22KF2 | RNA polymerase Rpb7, amine-terminal domain protein. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.995 |
I7LWZ3_TETTS | Q231M7_TETTS | I7LWZ3 | Q231M7 | RNA polymerase Rpb7, amine-terminal domain protein. | General transcription factor IIB. | 0.999 |
I7LWZ3_TETTS | Q235X0_TETTS | I7LWZ3 | Q235X0 | RNA polymerase Rpb7, amine-terminal domain protein. | DNA-directed RNA polymerase I and III subunit RPAC1. | 0.990 |
page 1 of 6