STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q22C11_TETTSCyclin-dependent kinase-like protein. (331 aa)    
Predicted Functional Partners:
I7MGZ2_TETTS
Transcription factor tfb4.
    
 0.957
I7M9F6_TETTS
General transcription factor IIH subunit.
   
 0.951
Q22KF2_TETTS
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.938
I7LXA1_TETTS
Helicase carboxy-terminal domain protein.
    
 0.903
I7M2Q2_TETTS
DNA repair helicase.
    
 0.903
Q231M7_TETTS
General transcription factor IIB.
   
 0.856
A4VDR4_TETTS
Conjugation stage-specific protein.
   
 0.850
I7LWZ3_TETTS
RNA polymerase Rpb7, amine-terminal domain protein.
    
 0.828
Q235X0_TETTS
DNA-directed RNA polymerase I and III subunit RPAC1.
   
 0.796
I7M6R9_TETTS
DNA-directed RNA polymerase subunit K.
    
 0.780
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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