STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q22XZ2_TETTSRBR-type E3 ubiquitin transferase. (616 aa)    
Predicted Functional Partners:
Q22S05_TETTS
Ubiquitin-conjugating enzyme family protein.
    
 0.558
Q22KB0_TETTS
Anaphase-promoting complex subunit 11 RING-H2 finger protein.
    
 0.523
A4VDK0_TETTS
Ubiquitin.
    
  0.496
I7MEQ7_TETTS
Ubiquitin/ribosomal fusion protein, putative.
    
  0.496
Q22T79_TETTS
Ubiquitin.
    
  0.496
I7MAZ2_TETTS
Ubiquitin family protein.
    
  0.465
I7MMJ4_TETTS
Ubiquitin-40S ribosomal protein S27a.
    
  0.465
Q22L31_TETTS
Uncharacterized protein.
    
  0.465
W7XC40_TETTS
Ubiquitin-like Rad60 SUMO-like protein.
    
  0.465
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.