STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q234B3_TETTSC3HC4 type (RING finger) zinc finger protein. (560 aa)    
Predicted Functional Partners:
I7MFS9_TETTS
Small ubiquitin-related modifier.
    
 0.814
I7LWR4_TETTS
Ubiquitin-conjugating enzyme.
    
 0.697
I7MIS2_TETTS
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.697
Q235M6_TETTS
Ubiquitin-conjugating enzyme.
    
 0.697
Q24BB2_TETTS
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...]
   
 
 0.657
Q238S4_TETTS
Ubiquitin carboxyl-terminal hydrolase family protein.
   
 0.624
Q22UT0_TETTS
Ubiquitin carboxyl-terminal hydrolase.
   
  
 0.521
I7M061_TETTS
Transmembrane protein, putative.
      
 0.515
I7M8Y2_TETTS
RING Zn-finger protein, putative.
      
 0.491
I7MG23_TETTS
Pre-mRNA processing factor 3 (Prp3) protein.
   
  
 0.459
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.