Q23K89_TETTS protein (Tetrahymena thermophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Q23K89_TETTS

Rap/ran-GAP protein. (2118 aa)

Predicted Functional Partners:

I7M028_TETTS

0.711

I7MM94_TETTS

0.711

Q229E4_TETTS

0.711

Q233W8_TETTS

0.711

Q239B0_TETTS

0.711

Q23CQ4_TETTS

0.711

Q23TG2_TETTS

0.711

I7M7R1_TETTS

0.703

I7MFL8_TETTS

0.703

Q22T00_TETTS

0.638

Your Current Organism:

Tetrahymena thermophila

NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I7M028_TETTS	I7M7R1_TETTS	I7M028	I7M7R1	Small guanosine triphosphatase family Ras family protein.	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	0.692
I7M028_TETTS	I7MFL8_TETTS	I7M028	I7MFL8	Small guanosine triphosphatase family Ras family protein.	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	0.705
I7M028_TETTS	Q23K89_TETTS	I7M028	Q23K89	Small guanosine triphosphatase family Ras family protein.	Rap/ran-GAP protein.	0.711
I7M7R1_TETTS	I7M028_TETTS	I7M7R1	I7M028	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Small guanosine triphosphatase family Ras family protein.	0.692
I7M7R1_TETTS	I7MM94_TETTS	I7M7R1	I7MM94	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Small GTP-binding domain protein.	0.669
I7M7R1_TETTS	Q229E4_TETTS	I7M7R1	Q229E4	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Ras family small GTPase.	0.669
I7M7R1_TETTS	Q22T00_TETTS	I7M7R1	Q22T00	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Uncharacterized protein.	0.968
I7M7R1_TETTS	Q233W8_TETTS	I7M7R1	Q233W8	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Ras family protein.	0.669
I7M7R1_TETTS	Q239B0_TETTS	I7M7R1	Q239B0	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Ras family protein.	0.669
I7M7R1_TETTS	Q23CQ4_TETTS	I7M7R1	Q23CQ4	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Ras family protein.	0.669
I7M7R1_TETTS	Q23K89_TETTS	I7M7R1	Q23K89	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Rap/ran-GAP protein.	0.703
I7M7R1_TETTS	Q23TG2_TETTS	I7M7R1	Q23TG2	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Ras family small GTPase.	0.746
I7MFL8_TETTS	I7M028_TETTS	I7MFL8	I7M028	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Small guanosine triphosphatase family Ras family protein.	0.705
I7MFL8_TETTS	I7MM94_TETTS	I7MFL8	I7MM94	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Small GTP-binding domain protein.	0.669
I7MFL8_TETTS	Q229E4_TETTS	I7MFL8	Q229E4	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Ras family small GTPase.	0.669
I7MFL8_TETTS	Q22T00_TETTS	I7MFL8	Q22T00	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Uncharacterized protein.	0.968
I7MFL8_TETTS	Q233W8_TETTS	I7MFL8	Q233W8	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Ras family protein.	0.669
I7MFL8_TETTS	Q239B0_TETTS	I7MFL8	Q239B0	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Ras family protein.	0.669
I7MFL8_TETTS	Q23CQ4_TETTS	I7MFL8	Q23CQ4	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Ras family protein.	0.669
I7MFL8_TETTS	Q23K89_TETTS	I7MFL8	Q23K89	Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP-binding Rac1)-like protein.	Rap/ran-GAP protein.	0.703