STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q23PZ2_TETTSPyridoxal-binding domain pyridoxal-dependent decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (504 aa)    
Predicted Functional Partners:
Q24BV5_TETTS
Ornithine aminotransferase.
    
 0.972
I7M065_TETTS
Spermine/spermidine synthase.
  
 0.966
I7M0X1_TETTS
Spermidine synthase.
  
 0.966
I7MB26_TETTS
Spermine/spermidine synthase.
  
 0.966
I7MJ90_TETTS
Diaminopimelate epimerase.
  
 0.837
Q236D2_TETTS
Arginase; Belongs to the arginase family.
  
 
 0.793
I7LW93_TETTS
Arginase; Belongs to the arginase family.
  
 
 0.782
Q23DD8_TETTS
tRNA-binding domain-containing protein.
  
 
 0.734
I7ML79_TETTS
Lysine-ketoglutarate reductase saccharopine dehydrogenase enzyme, putative.
  
 
 0.704
Q22KR8_TETTS
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.704
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.