W7XAM3_TETTS protein (Tetrahymena thermophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W7XAM3_TETTS

Transmembrane protein, putative. (1748 aa)

Predicted Functional Partners:

I7LZF4_TETTS

0.698

Q236K0_TETTS

0.695

I7M0X3_TETTS

0.598

Q22BM0_TETTS

0.551

W7XH52_TETTS

0.551

W7XJY1_TETTS

0.551

Q23VY6_TETTS

0.530

Q24CY3_TETTS

0.530

A4VEX9_TETTS

0.498

I7LSV4_TETTS

0.498

Your Current Organism:

Tetrahymena thermophila

NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4VEX9_TETTS	I7LZF4_TETTS	A4VEX9	I7LZF4	Uncharacterized protein.	CAP-gly domain protein.	0.655
A4VEX9_TETTS	I7M0X3_TETTS	A4VEX9	I7M0X3	Uncharacterized protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.584
A4VEX9_TETTS	Q236K0_TETTS	A4VEX9	Q236K0	Uncharacterized protein.	Dynamitin protein.	0.617
A4VEX9_TETTS	W7XAM3_TETTS	A4VEX9	W7XAM3	Uncharacterized protein.	Transmembrane protein, putative.	0.498
I7LSV4_TETTS	I7LZF4_TETTS	I7LSV4	I7LZF4	Dynein heavy chain 1, axonemal protein.	CAP-gly domain protein.	0.655
I7LSV4_TETTS	I7M0X3_TETTS	I7LSV4	I7M0X3	Dynein heavy chain 1, axonemal protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.584
I7LSV4_TETTS	Q236K0_TETTS	I7LSV4	Q236K0	Dynein heavy chain 1, axonemal protein.	Dynamitin protein.	0.617
I7LSV4_TETTS	W7XAM3_TETTS	I7LSV4	W7XAM3	Dynein heavy chain 1, axonemal protein.	Transmembrane protein, putative.	0.498
I7LZF4_TETTS	A4VEX9_TETTS	I7LZF4	A4VEX9	CAP-gly domain protein.	Uncharacterized protein.	0.655
I7LZF4_TETTS	I7LSV4_TETTS	I7LZF4	I7LSV4	CAP-gly domain protein.	Dynein heavy chain 1, axonemal protein.	0.655
I7LZF4_TETTS	I7M0X3_TETTS	I7LZF4	I7M0X3	CAP-gly domain protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.974
I7LZF4_TETTS	Q236K0_TETTS	I7LZF4	Q236K0	CAP-gly domain protein.	Dynamitin protein.	0.999
I7LZF4_TETTS	Q23VY6_TETTS	I7LZF4	Q23VY6	CAP-gly domain protein.	Uncharacterized protein.	0.471
I7LZF4_TETTS	Q24CY3_TETTS	I7LZF4	Q24CY3	CAP-gly domain protein.	Uncharacterized protein.	0.471
I7LZF4_TETTS	W7XAM3_TETTS	I7LZF4	W7XAM3	CAP-gly domain protein.	Transmembrane protein, putative.	0.698
I7M0X3_TETTS	A4VEX9_TETTS	I7M0X3	A4VEX9	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Uncharacterized protein.	0.584
I7M0X3_TETTS	I7LSV4_TETTS	I7M0X3	I7LSV4	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Dynein heavy chain 1, axonemal protein.	0.584
I7M0X3_TETTS	I7LZF4_TETTS	I7M0X3	I7LZF4	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	CAP-gly domain protein.	0.974
I7M0X3_TETTS	Q22BM0_TETTS	I7M0X3	Q22BM0	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Nuclear movement protein.	0.650
I7M0X3_TETTS	Q236K0_TETTS	I7M0X3	Q236K0	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Dynamitin protein.	0.975