Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR24248.1 | EAR24249.1 | A20C1_00135 | A20C1_00140 | Integral membrane protein; COG0586 Uncharacterized membrane-associated protein. | Putative acetolactate synthase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family. | 0.402 |
EAR24248.1 | EAR25193.1 | A20C1_00135 | A20C1_01356 | Integral membrane protein; COG0586 Uncharacterized membrane-associated protein. | Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. | 0.788 |
EAR24248.1 | EAR25301.1 | A20C1_00135 | A20C1_01896 | Integral membrane protein; COG0586 Uncharacterized membrane-associated protein. | Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase. | 0.406 |
EAR24249.1 | EAR24248.1 | A20C1_00140 | A20C1_00135 | Putative acetolactate synthase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family. | Integral membrane protein; COG0586 Uncharacterized membrane-associated protein. | 0.402 |
EAR25193.1 | EAR24248.1 | A20C1_01356 | A20C1_00135 | Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. | Integral membrane protein; COG0586 Uncharacterized membrane-associated protein. | 0.788 |
EAR25301.1 | EAR24248.1 | A20C1_01896 | A20C1_00135 | Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase. | Integral membrane protein; COG0586 Uncharacterized membrane-associated protein. | 0.406 |