Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR23951.1 | EAR23952.1 | A20C1_10595 | A20C1_10600 | Hypothetical protein. | COG2307 Uncharacterized protein conserved in bacteria. | 0.995 |
EAR23951.1 | EAR25070.1 | A20C1_10595 | A20C1_00741 | Hypothetical protein. | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | 0.813 |
EAR23952.1 | EAR23951.1 | A20C1_10600 | A20C1_10595 | COG2307 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.995 |
EAR23952.1 | EAR25070.1 | A20C1_10600 | A20C1_00741 | COG2307 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | 0.805 |
EAR25069.1 | EAR25070.1 | A20C1_00736 | A20C1_00741 | COG0640 Predicted transcriptional regulators. | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | 0.438 |
EAR25070.1 | EAR23951.1 | A20C1_00741 | A20C1_10595 | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | Hypothetical protein. | 0.813 |
EAR25070.1 | EAR23952.1 | A20C1_00741 | A20C1_10600 | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | COG2307 Uncharacterized protein conserved in bacteria. | 0.805 |
EAR25070.1 | EAR25069.1 | A20C1_00741 | A20C1_00736 | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | COG0640 Predicted transcriptional regulators. | 0.438 |
EAR25070.1 | EAR25915.1 | A20C1_00741 | A20C1_08543 | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | COG0753 Catalase; Belongs to the catalase family. | 0.608 |
EAR25915.1 | EAR25070.1 | A20C1_08543 | A20C1_00741 | COG0753 Catalase; Belongs to the catalase family. | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | 0.608 |