STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25101.1Hypothetical protein; COG1716 FOG: FHA domain. (202 aa)    
Predicted Functional Partners:
EAR24331.1
Alpha-ketoglutarate decarboxylase; COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
    
 
 0.999
EAR25339.1
COG0515 Serine/threonine protein kinase.
   
 
 0.990
EAR26177.1
COG0515 Serine/threonine protein kinase.
   
 
 0.990
EAR25104.1
Fibronectin-related protein.
 
  
  0.884
EAR25106.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.862
EAR25107.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.858
EAR25103.1
COG0515 Serine/threonine protein kinase.
 
 
   0.839
EAR25108.1
Hypothetical protein; COG3456 Uncharacterized conserved protein, contains FHA domain.
 
     0.824
EAR25102.1
COG0631 Serine/threonine protein phosphatase.
  
    0.748
ribA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
  0.698
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.