STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25103.1COG0515 Serine/threonine protein kinase. (440 aa)    
Predicted Functional Partners:
EAR25102.1
COG0631 Serine/threonine protein phosphatase.
 
 0.952
EAR26181.1
COG0631 Serine/threonine protein phosphatase.
 
 0.915
EAR25104.1
Fibronectin-related protein.
 
  
 0.910
EAR25106.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.908
EAR25329.1
Hypothetical protein; COG1716 FOG: FHA domain.
  
 
 
 0.888
EAR25107.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.856
EAR25108.1
Hypothetical protein; COG3456 Uncharacterized conserved protein, contains FHA domain.
 
 
   0.846
EAR25101.1
Hypothetical protein; COG1716 FOG: FHA domain.
 
 
   0.839
EAR26183.1
Hypothetical protein; COG1716 FOG: FHA domain.
 
 
 
 0.747
EAR25105.1
Methanol dehydrogenase regulatory protein; COG0714 MoxR-like ATPases.
       0.708
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.