STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25164.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
EAR26203.1
Beta-lactamase related protein; COG2367 Beta-lactamase class A.
  
     0.637
EAR25163.1
Hypothetical protein; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
       0.596
EAR25101.1
Hypothetical protein; COG1716 FOG: FHA domain.
  
     0.539
EAR25093.1
Hypothetical protein; COG0645 Predicted kinase.
  
     0.483
EAR25615.1
Hypothetical protein.
  
     0.477
EAR24968.1
Probable UDP-glucose-4-epimerase.
  
     0.471
EAR24231.1
Transferase; COG0558 Phosphatidylglycerophosphate synthase.
  
     0.462
EAR25107.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.460
EAR25385.1
Integral membrane protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.435
lysS
lysyl-tRNA synthetase.
  
     0.429
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.