STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25172.1Putative monooxygenase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (371 aa)    
Predicted Functional Partners:
EAR25173.1
COG0431 Predicted flavoprotein.
  0.994
EAR25171.1
Lipase; COG0657 Esterase/lipase.
       0.489
EAR24423.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
   
 
  0.450
EAR24201.1
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
  
  0.432
EAR25901.1
Iron-sulfur oxidoreductase beta subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 
 0.421
EAR24422.1
Hypothetical protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
   
 
  0.417
EAR25988.1
Putative ABC transporter membrane protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
   
 
  0.417
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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