STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25192.1ATP-binding protein of ABC transporter; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (241 aa)    
Predicted Functional Partners:
EAR25193.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 0.987
EAR25191.1
COG0845 Membrane-fusion protein.
 
 
 0.982
EAR24874.1
Permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 0.934
EAR24747.1
Integral membrane protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 0.839
EAR23701.1
Oligopeptide ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
    
0.835
EAR26238.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.769
EAR24252.1
COG0765 ABC-type amino acid transport system, permease component.
 
 
 
  0.768
EAR24632.1
COG0765 ABC-type amino acid transport system, permease component.
 
 
 
  0.727
EAR23703.1
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
    0.682
EAR25934.1
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
    0.603
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.