STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25220.1Putative glutamate transporter glutamate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family. (289 aa)    
Predicted Functional Partners:
EAR25221.1
Putative glutamate transporter permease; COG0765 ABC-type amino acid transport system, permease component.
 0.999
EAR25222.1
Glutamate permease; COG0765 ABC-type amino acid transport system, permease component.
 
 0.980
EAR25219.1
Glutamate uptake system ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
  0.970
EAR24633.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.851
EAR23858.1
Putative arginine/ornithine transport ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.824
EAR24252.1
COG0765 ABC-type amino acid transport system, permease component.
 
  0.821
EAR24223.1
Putative ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.817
EAR24251.1
ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.816
EAR24632.1
COG0765 ABC-type amino acid transport system, permease component.
 
  0.807
EAR24222.1
COG0765 ABC-type amino acid transport system, permease component.
  0.769
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.