STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25339.1COG0515 Serine/threonine protein kinase. (646 aa)    
Predicted Functional Partners:
EAR25329.1
Hypothetical protein; COG1716 FOG: FHA domain.
 
 
 
 0.999
EAR26183.1
Hypothetical protein; COG1716 FOG: FHA domain.
 
 
 
 0.995
EAR26182.1
Secreted protein; COG1716 FOG: FHA domain.
 
 
 
 0.994
EAR25101.1
Hypothetical protein; COG1716 FOG: FHA domain.
   
 
 0.990
EAR25108.1
Hypothetical protein; COG3456 Uncharacterized conserved protein, contains FHA domain.
   
 
 0.990
EAR25102.1
COG0631 Serine/threonine protein phosphatase.
 0.988
EAR26181.1
COG0631 Serine/threonine protein phosphatase.
 0.987
EAR26056.1
Cell surface polysaccharide biosynthesis / Chain length determinant protein; COG3944 Capsular polysaccharide biosynthesis protein.
    
 
 0.851
EAR24221.1
Putative transporter substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
  
 0.825
ribA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
 0.713
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.