STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR23702.1Putative oligopeptide binding protein precursor; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (346 aa)    
Predicted Functional Partners:
EAR23703.1
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.996
EAR23704.1
ABC transporter, membrane spanning protein (dipeptide); COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.993
EAR25785.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.985
EAR25364.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.983
EAR25497.1
ABC transporter permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.983
EAR25934.1
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.983
EAR23762.1
ABC transporter, permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.983
EAR24562.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.980
EAR25791.1
Putative ABC transporter, permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.967
EAR25394.1
ABC transporter, permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.952
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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