STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25353.1AhpC/TSA family protein; COG1225 Peroxiredoxin. (158 aa)    
Predicted Functional Partners:
EAR24776.1
Bcp; COG1225 Peroxiredoxin.
  
     0.709
aceE
Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
    0.571
EAR25355.1
Hypothetical protein; COG2508 Regulator of polyketide synthase expression.
       0.529
EAR25349.1
Hypothetical protein.
 
     0.479
EAR24398.1
COG0134 Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
  
    0.474
EAR25356.1
COG0331 (acyl-carrier-protein) S-malonyltransferase.
       0.434
EAR25352.1
Putative amino acid decarboxylase, Pyridoxal-dependent protein; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
  
    0.411
EAR26149.1
COG0492 Thioredoxin reductase.
  
  
 0.401
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.