STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25467.1Putative transmembrane transport protein; COG0475 Kef-type K+ transport systems, membrane components. (400 aa)    
Predicted Functional Partners:
EAR25466.1
Hypothetical protein; COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels.
 
  
 0.966
EAR25463.1
Hypothetical protein.
       0.590
EAR25464.1
COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes.
       0.590
EAR25465.1
Hypothetical protein; COG1592 Rubrerythrin.
       0.590
EAR25461.1
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
   
   0.449
EAR25460.1
Hypothetical protein; COG0277 FAD/FMN-containing dehydrogenases.
       0.424
EAR25462.1
COG0300 Short-chain dehydrogenases of various substrate specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.424
EAR25305.1
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the RimK family.
     
 0.421
EAR25849.1
Hypothetical protein.
 
    0.416
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.