STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25663.1Putative ABC transporter periplasmic sugar-binding protein; COG1879 ABC-type sugar transport system, periplasmic component. (360 aa)    
Predicted Functional Partners:
EAR23640.1
ABC transporter, nucleotide binding/ATPase protein (sugar); COG1129 ABC-type sugar transport system, ATPase component.
 
  0.921
EAR23668.1
ABC sugar transporter, inner membrane subunit; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.909
EAR23669.1
ABC sugar transporter, inner membrane subunit; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.902
EAR23942.1
Putative ABC transporter permease; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.876
EAR23943.1
Putative ABC transporter permease; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.853
EAR26305.1
ABC transporter, membrane spanning protein (ribose); COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.838
EAR23670.1
COG1129 ABC-type sugar transport system, ATPase component.
 
  0.835
EAR24769.1
Permease protein of sugar ABC transporter; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.811
EAR24641.1
COG1129 ABC-type sugar transport system, ATPase component.
  
 0.811
EAR26306.1
ABC transporter, membrane spanning protein (ribose); COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.792
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.