STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25674.1COG2213 Phosphotransferase system, mannitol-specific IIBC component. (508 aa)    
Predicted Functional Partners:
EAR25673.1
PTS system, mannitol-specific enzyme II, A component; COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain.
 
 0.999
mtlD
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
 
 0.998
EAR25677.1
Transcription antiterminator, BglG family protein; COG3711 Transcriptional antiterminator.
 
 
 0.997
EAR25675.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
   
  0.944
EAR25004.1
Phosphoenolpyruvate-protein phosphotransferase; COG3412 Uncharacterized protein conserved in bacteria.
   
 0.934
EAR24388.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
   
  0.866
EAR23793.1
Putative PTS fructose-specific enzyme IIABC; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
 0.861
EAR25676.1
Hypothetical protein; COG1440 Phosphotransferase system cellobiose-specific component IIB.
  
    0.772
EAR24198.1
COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
 0.535
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
       0.470
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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