STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25676.1Hypothetical protein; COG1440 Phosphotransferase system cellobiose-specific component IIB. (110 aa)    
Predicted Functional Partners:
EAR25675.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
    
  0.915
EAR25677.1
Transcription antiterminator, BglG family protein; COG3711 Transcriptional antiterminator.
  
 
 0.880
EAR24267.1
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
  
 
 0.778
EAR25820.1
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
  
 
 0.778
EAR26226.1
Putative cellobiose hydrolase; COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
  
 
 0.778
EAR25674.1
COG2213 Phosphotransferase system, mannitol-specific IIBC component.
  
    0.772
EAR23794.1
COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
  
  
 0.733
EAR25673.1
PTS system, mannitol-specific enzyme II, A component; COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain.
  
 
  0.709
mtlD
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
  
    0.668
EAR24388.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
    
  0.640
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.