STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25737.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
EAR25738.1
COG5516 Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
       0.781
EAR24995.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.699
EAR25734.1
Hypothetical protein.
       0.697
EAR25735.1
Hypothetical protein.
       0.693
EAR25736.1
COG0681 Signal peptidase I.
       0.693
EAR26147.1
Membrane protein.
  
     0.680
EAR25181.1
Hypothetical protein; COG0406 Fructose-2,6-bisphosphatase.
  
     0.657
EAR24810.1
Exopolysaccharide production protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
     0.654
EAR23744.1
DNA-binding protein.
  
     0.622
EAR25733.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
       0.603
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.