STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25815.1COG1940 Transcriptional regulator/sugar kinase. (405 aa)    
Predicted Functional Partners:
EAR23793.1
Putative PTS fructose-specific enzyme IIABC; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
    
 0.897
EAR25816.1
COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.788
EAR25817.1
COG0395 ABC-type sugar transport system, permease component.
     
 0.748
EAR25818.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
       0.746
EAR25346.1
Glucokinase; COG1940 Transcriptional regulator/sugar kinase.
  
  
 0.741
EAR24983.1
Possible sugar kinase; COG1940 Transcriptional regulator/sugar kinase.
  
  
 
0.685
EAR25820.1
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
  
 
  0.621
EAR25943.1
COG0033 Phosphoglucomutase.
     
 0.572
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.569
EAR25819.1
ABC transporter, substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
    0.569
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.