STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25840.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (353 aa)    
Predicted Functional Partners:
EAR25841.1
COG4555 ABC-type Na+ transport system, ATPase component.
 
  0.984
EAR24732.1
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
  0.766
EAR24240.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
   
  0.712
EAR25051.1
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
   
  0.712
EAR24109.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
   
  0.712
EAR24120.1
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
   
  0.712
EAR25030.1
ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
   
  0.712
EAR26252.1
ABC transporter, integral membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
   
  0.712
EAR26253.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
   
  0.712
EAR23971.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
   
  0.712
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.