STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25901.1Iron-sulfur oxidoreductase beta subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. (319 aa)    
Predicted Functional Partners:
EAR25898.1
COG2124 Cytochrome P450.
 0.999
EAR23845.1
COG2124 Cytochrome P450.
 0.997
EAR23818.1
Hypothetical protein; COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit.
  
 0.963
EAR24052.1
COG1290 Cytochrome b subunit of the bc complex.
    
 0.955
EAR24393.1
COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
   
 0.954
EAR24672.1
ferredoxin/ferredoxin-NADP reductase; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
   
 0.954
EAR25773.1
Putative oxidase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.944
EAR24359.1
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
  
 
 0.934
EAR24342.1
COG3239 Fatty acid desaturase.
  
 
 0.932
EAR25408.1
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.927
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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