STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR25903.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
EAR25514.1
Putative ROK family transcriptional regulator; COG1940 Transcriptional regulator/sugar kinase.
    
  0.573
EAR25902.1
Glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein; COG2514 Predicted ring-cleavage extradiol dioxygenase.
       0.518
EAR26083.1
KHG/KDPG family aldolase/carbohydrate kinase, PfkB family protein; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
    
  0.503
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.503
EAR24186.1
COG0836 Mannose-1-phosphate guanylyltransferase.
    
  0.496
EAR26254.1
Hypothetical protein; COG0662 Mannose-6-phosphate isomerase.
    
  0.495
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.487
EAR24366.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
    
  0.484
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 0.479
EAR24392.1
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.473
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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