Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR26004.1ABC transporter, permease protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (293 aa)    
Predicted Functional Partners:
EAR26003.1
ABC transporter, nucleotide binding/ATPase protein (nitrate); COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  0.978
EAR26001.1
ABC transporter, periplasmic substrate-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  0.965
EAR26005.1
Putative oxidoreductase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 
  0.926
EAR26032.1
Thiamine biosynthesis; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  0.913
EAR26030.1
ABC transporter (ATP-binding protein); COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  0.874
EAR26002.1
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
    
0.833
EAR25988.1
Putative ABC transporter membrane protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
  0.811
EAR26006.1
Dihydropyrimidinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
 
     0.798
EAR24423.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  0.763
EAR24422.1
Hypothetical protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
  0.698
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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