STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR26049.1COG1457 Purine-cytosine permease and related proteins; Belongs to the purine-cytosine permease (2.A.39) family. (469 aa)    
Predicted Functional Partners:
EAR26048.1
Hypothetical protein; COG0388 Predicted amidohydrolase.
 
     0.727
EAR26050.1
COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
 
    0.656
EAR26047.1
Hydrolase, carbon-nitrogen family protein; COG0388 Predicted amidohydrolase.
       0.640
EAR25350.1
Transport-protein, putative permease for cytosine/purines; COG1457 Purine-cytosine permease and related proteins.
  
     0.596
EAR23781.1
COG0531 Amino acid transporters.
  
    0.540
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.448
carB
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family.
   
    0.414
carA
COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
   
    0.400
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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