STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR26291.1Putative ABC transporter ATP-binding protein; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. (1108 aa)    
Predicted Functional Partners:
EAR26292.1
COG1294 Cytochrome bd-type quinol oxidase, subunit 2.
 
  
 0.998
EAR26293.1
AppC; COG1271 Cytochrome bd-type quinol oxidase, subunit 1.
  
 0.997
EAR26295.1
Integral membrane protein; COG0501 Zn-dependent protease with chaperone function.
 
     0.791
EAR26294.1
Hypothetical protein; COG3682 Predicted transcriptional regulator.
 
     0.782
EAR24998.1
Putative ABC transporter ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
 
0.737
EAR24819.1
ATP-binding protein of ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
 
0.724
EAR24997.1
ABC transporter, ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
 
0.724
EAR24754.1
ABC transporter, NBP/MSD fusion protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
 
0.724
EAR24169.1
ABC transporter, NBP/MSD fusion protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
 
0.724
EAR24807.1
Hypothetical protein; COG1620 L-lactate permease.
  
     0.562
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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