STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR23959.1Putative transporter; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (352 aa)    
Predicted Functional Partners:
hmuV
ABC-type hemin transport system ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 0.994
EAR25996.1
Iron compound ABC transporter, ATP-binding protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 0.973
EAR23870.1
Fe uptake system permease; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 0.969
EAR24903.1
Hemin receptor precursor; COG4558 ABC-type hemin transport system, periplasmic component.
 
 
 0.963
EAR25831.1
The iron-vibriobactin/enterobactin uptake porter; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 0.957
EAR25830.1
Iron ABC transporter, substrate binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
 0.915
EAR23868.1
Iron transport system substrate-binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.837
EAR25994.1
Iron transport system substrate-binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.837
EAR23958.1
COG0095 Lipoate-protein ligase A.
       0.773
EAR23957.1
Hypothetical protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
       0.661
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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