STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR24006.1COG2259 Predicted membrane protein. (182 aa)    
Predicted Functional Partners:
EAR24004.1
Hypothetical protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
  
    0.934
EAR24003.1
MoaA-related protein; COG0535 Predicted Fe-S oxidoreductases.
  
    0.824
EAR24005.1
Hypothetical protein.
       0.773
EAR24002.1
Putative integral membrane protein.
       0.528
EAR24007.1
COG0477 Permeases of the major facilitator superfamily.
       0.495
EAR24008.1
Putative two-component system response regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.482
EAR24009.1
COG0642 Signal transduction histidine kinase.
       0.482
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.