STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR24618.1Hydrolase, putative; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (293 aa)    
Predicted Functional Partners:
EAR24617.1
COG1309 Transcriptional regulator.
 
     0.879
EAR25149.1
COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
 
   0.788
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
  0.781
EAR26235.1
COG0506 Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.602
EAR24616.1
COG4815 Uncharacterized protein conserved in bacteria.
       0.458
EAR24291.1
COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains.
   
   0.443
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
   0.443
EAR23672.1
COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains.
   
   0.443
EAR23736.1
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
    
 0.415
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.