STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR24644.1Potassium uptake protein; COG0569 K+ transport systems, NAD-binding component. (223 aa)    
Predicted Functional Partners:
EAR24645.1
Potassium uptake protein; COG0168 Trk-type K+ transport systems, membrane components.
 
 0.986
EAR23948.1
Putative cation transporter; COG0168 Trk-type K+ transport systems, membrane components.
 
 0.943
EAR24408.1
Putative RNA-binding Sun protein; COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.576
EAR24646.1
Transcriptional regulator, ArsR family protein; COG0640 Predicted transcriptional regulators.
       0.572
EAR24643.1
Probable transcriptional repressor protein; COG1940 Transcriptional regulator/sugar kinase.
       0.498
EAR24647.1
Excisionase; COG1910 Periplasmic molybdate-binding protein/domain.
       0.442
EAR26216.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.432
EAR24642.1
Solute-binding protein; COG4213 ABC-type xylose transport system, periplasmic component.
       0.419
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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