STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR24732.1Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component. (291 aa)    
Predicted Functional Partners:
EAR24731.1
Putative transporter; COG0842 ABC-type multidrug transport system, permease component.
 
  0.975
EAR25990.1
Putative ABC transporter ATP-binding protein; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  
 
0.913
EAR25446.1
COG1125 ABC-type proline/glycine betaine transport systems, ATPase components.
 
     
0.832
EAR25036.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
 
0.828
EAR24730.1
Two-component system, sensor protein; COG4585 Signal transduction histidine kinase.
 
    0.816
EAR24729.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
      0.773
EAR25840.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
  0.766
EAR25031.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
  0.759
EAR23930.1
COG1511 Predicted membrane protein.
  
 
 0.740
EAR23973.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
   
  0.712
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.