STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR24127.1COG1175 ABC-type sugar transport systems, permease components. (306 aa)    
Predicted Functional Partners:
EAR24759.1
Bacterial extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.997
EAR24128.1
COG0395 ABC-type sugar transport system, permease component.
 0.986
EAR24919.1
Glycerol-phosphate porter; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.953
EAR26096.1
Putative sugar-binding lipoprotein; COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.890
EAR24984.1
Putative sugar transporter integral membrane protein; COG0395 ABC-type sugar transport system, permease component.
 
 0.867
EAR26098.1
COG0395 ABC-type sugar transport system, permease component.
 0.852
EAR26245.1
COG0395 ABC-type sugar transport system, permease component.
 
 0.850
EAR24687.1
COG3833 ABC-type maltose transport systems, permease component.
  0.849
EAR25837.1
COG0395 ABC-type sugar transport system, permease component.
 0.828
EAR26068.1
Putative ABC transporter permease protein; COG0395 ABC-type sugar transport system, permease component.
 0.826
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.