STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR24229.1COG0747 ABC-type dipeptide transport system, periplasmic component. (589 aa)    
Predicted Functional Partners:
EAR23761.1
ABC transporter, permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.860
EAR23762.1
ABC transporter, permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.844
EAR23763.1
Integral membrane protein.
  
     0.764
EAR25396.1
ABC transporter, solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
     
 
0.703
EAR25495.1
ABC transporter oligopeptide binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
     
  0.637
EAR25783.1
Putative ABC transporter periplasmic binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
     
  0.637
EAR23764.1
Oligopeptide porter; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.565
EAR23705.1
Possible dipeptide ABC transporter (dipeptide-binding protein); COG0747 ABC-type dipeptide transport system, periplasmic component.
     
  0.563
EAR25366.1
Bacterial extracellular solute-binding protein, family 5; COG0747 ABC-type dipeptide transport system, periplasmic component.
     
  0.563
EAR25936.1
Oligopeptide ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
     
  0.563
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.