Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_0140 | VF_0141 | VF_0140 | VF_0141 | UDP-N-acetylglucosamine 4,6-dehydratase. | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | 0.967 |
VF_0140 | VF_0145 | VF_0140 | VF_0145 | UDP-N-acetylglucosamine 4,6-dehydratase. | Mannose-1-phosphate guanyltransferase. | 0.880 |
VF_0140 | VF_0146 | VF_0140 | VF_0146 | UDP-N-acetylglucosamine 4,6-dehydratase. | Oxidoreductase. | 0.716 |
VF_0140 | VF_0349 | VF_0140 | VF_0349 | UDP-N-acetylglucosamine 4,6-dehydratase. | Chain length regulator, exopolysaccharide biosynthesis protein. | 0.760 |
VF_0140 | neuA | VF_0140 | VF_0147 | UDP-N-acetylglucosamine 4,6-dehydratase. | Acylneuraminate cytidylyltransferase. | 0.774 |
VF_0140 | neuB | VF_0140 | VF_0143 | UDP-N-acetylglucosamine 4,6-dehydratase. | N-acetylneuraminate synthase. | 0.888 |
VF_0140 | neuC | VF_0140 | VF_0142 | UDP-N-acetylglucosamine 4,6-dehydratase. | UDP-N-acetylglucosamine 2-epimerase. | 0.893 |
VF_0140 | neuD | VF_0140 | VF_0144 | UDP-N-acetylglucosamine 4,6-dehydratase. | Sialic acid biosynthesis protein NeuD. | 0.873 |
VF_0140 | ptmA | VF_0140 | VF_0148 | UDP-N-acetylglucosamine 4,6-dehydratase. | Post-translational flagellin modification protein A. | 0.691 |
VF_0140 | wzc | VF_0140 | VF_0165 | UDP-N-acetylglucosamine 4,6-dehydratase. | Protein-tyrosine kinase, chain length regulator in capsular polysaccharide biosynthesis. | 0.760 |
VF_0141 | VF_0140 | VF_0141 | VF_0140 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | UDP-N-acetylglucosamine 4,6-dehydratase. | 0.967 |
VF_0141 | VF_0145 | VF_0141 | VF_0145 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | Mannose-1-phosphate guanyltransferase. | 0.970 |
VF_0141 | VF_0146 | VF_0141 | VF_0146 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | Oxidoreductase. | 0.913 |
VF_0141 | neuA | VF_0141 | VF_0147 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | Acylneuraminate cytidylyltransferase. | 0.923 |
VF_0141 | neuB | VF_0141 | VF_0143 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | N-acetylneuraminate synthase. | 0.949 |
VF_0141 | neuC | VF_0141 | VF_0142 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | UDP-N-acetylglucosamine 2-epimerase. | 0.965 |
VF_0141 | neuD | VF_0141 | VF_0144 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | Sialic acid biosynthesis protein NeuD. | 0.930 |
VF_0141 | ptmA | VF_0141 | VF_0148 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | Post-translational flagellin modification protein A. | 0.753 |
VF_0145 | VF_0140 | VF_0145 | VF_0140 | Mannose-1-phosphate guanyltransferase. | UDP-N-acetylglucosamine 4,6-dehydratase. | 0.880 |
VF_0145 | VF_0141 | VF_0145 | VF_0141 | Mannose-1-phosphate guanyltransferase. | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | 0.970 |
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